New computational methods to explore the rapidly expanding collection of high resolution three-dimensional RNA structures reveal new RNA structural motifs, identifying additional building blocks for complex RNA nanostructures.
Archive for the 'Computational nanotechnology' Category
A set of machine learning programs can now predict properties of small organic molecules as accurately as can calculations based upon the Schrödinger equation, but in milliseconds rather than hours.
Foldit game players have again out-performed scientists in protein design, this time improving the design of a protein designed from scratch to catalyze Diels-Alder cycloadditions.
A tutorial review available after free registration presents a theory-based exploration of the difficulty in moving from simple molecular switches to arrays of artificial molecular machines capable to doing substantial, useful external work.
RNA CAD tools developed for RNA-regulated control of gene expression in synthetic biology successfully engineered metabolic pathways in bacteria. Will engineering RNA-based genetic control systems lead to design tools for other RNA-based molecular machine systems?
A tutorial review addresses the distinction between the many simple artificial molecular devices that are currently available and truly effective artificial molecular machines that would mimic the ubiquitous molecular machines present in living systems.
In a lecture at Oxford Eric Drexler argued that atomically precise manufacturing will be the next great revolution in the material basis of civilization, and discussed how we can establish reliable knowledge about key aspects of such technologies.
Varying the length of the DNA used to connect the nanoparticles provides for a wide variety of nanoparticle sizes and crystal symmetries.
An algorithm helps design peptides that will self-assemble on a given surface to produce a supramolecular structure of desired geometry.
Submit your own work or nominate a colleague for the 2011 Foresight Institute Feynman Prizes.
New computational method screens for small molecules that bind to RNA molecules that move through a variety of conformations.
Does the recent discovery that quantum tunneling controls a chemical reaction of a carbene complicate theoretical studies of nanotechnology, especially of diamond mechanosynthesis?
Computational studies show that small diamond structures of the type that might serve as nanoparts in diamondoid molecular machinery are structurally stable.
A biochemical circuit built from 74 small DNA molecules demonstrates an approach that may enable embedded control of molecular devices.
The interactions of xenon atoms with a nanoelectromechanical system have now been measured to characterize the statistical noise caused by atomic fluctuations.
We are proud to announce our final conference program for Foresight@Google‘s 25th Anniversary Conference Celebration, held June 25-26 in Mountain View, CA. For $50 off registration use code: NANODOT This weekend – full of plenary talks, panels, and breakout sessions – is a unique opportunity to be stimulated, enlightened and inspired by direct interaction with [...]
A Monte-Carlo simulation shows that a simple self-replicating RNA-like molecule in a specific protective environment could evolve the ability to translate a genetic code to produce peptides.
Midnight tonight Pacific time is the deadline for the early registration rate on Foresight@Google, our 25th Anniversary Conference and Celebration. Check it out here: http://foresight.org/reunion Past participants have said: “This is mind candy for my soul. Having attended for two years now, this event stands alone in my mind as an opportunity to explore new horizons, [...]
New software for scaffolded DNA origami makes it easier to predict what shape will result from a given DNA template.
Combined computational and experimental study shows molecules walking, hopping and flying across a surface; may lead to controlling molecular motion.