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Archive for the 'Computational nanotechnology' Category

Nanotechnology milestone: general method for designing stable proteins

Posted by Jim Lewis on November 21st, 2012

Five proteins were designed from scratch and found to fold into stable proteins as designed, proving the ability to provide ideal, robust building blocks for artificial protein structures.

Measuring individual chemical bonds with noncontact-AFM

Posted by Jim Lewis on September 18th, 2012

Noncontact atomic force microscopy using a tip functionalized with a single molecule provides highly precise measurement of individual chemical bond lengths and bond orders (roughly, bond strength).

Rational design of peptoids: a route to advanced nanotechnology?

Posted by Jim Lewis on September 7th, 2012

A combination of theoretical and experimental work on peptoids, synthetic analogs of proteins, points to the ability to design peptoids with desired structures and functions.

Toward a method to design any needed catalyst?

Posted by Jim Lewis on August 6th, 2012

Computational insights into a fundamental organic synthesis reaction may lead to the ability to design a catalyst for any desired reaction.

SAVE THE DATE: The 2013 Foresight Technical Conference

Posted by Jim Lewis on July 12th, 2012

The 2013 Foresight Technical Conference: Illuminating Atomic Precision will be held January 11-13, 2013 in Palo Alto, CA USA.

Advancing nanotechnology with protein building blocks

Posted by Jim Lewis on June 6th, 2012

A variety of protein cage structures have been constructed by designing specific protein domains to self-assemble as atomically precise protein building blocks in defined geometries.

Will piezoelectric graphene provide options for nanoscale manipulation?

Posted by Jim Lewis on April 25th, 2012

Calculations using density functional theory have demonstrated that graphene can be made piezoelectric by adsorbing atoms or molecules on one surface, or by adsorbing different atoms or molecules on each surface.

Novel RNA structural motifs expand tool kit for RNA nanotechnology

Posted by Jim Lewis on February 26th, 2012

New computational methods to explore the rapidly expanding collection of high resolution three-dimensional RNA structures reveal new RNA structural motifs, identifying additional building blocks for complex RNA nanostructures.

Machine learning may improve molecular design for nanotechnology

Posted by Jim Lewis on February 22nd, 2012

A set of machine learning programs can now predict properties of small organic molecules as accurately as can calculations based upon the Schrödinger equation, but in milliseconds rather than hours.

Crowd-sourced protein design a promising path to advanced nanotechnology

Posted by Jim Lewis on January 24th, 2012

Foldit game players have again out-performed scientists in protein design, this time improving the design of a protein designed from scratch to catalyze Diels-Alder cycloadditions.

Arrays of artificial molecular machines could lead to atomically precise nanotechnology

Posted by Jim Lewis on December 29th, 2011

A tutorial review available after free registration presents a theory-based exploration of the difficulty in moving from simple molecular switches to arrays of artificial molecular machines capable to doing substantial, useful external work.

RNA CAD tool for synthetic biology may facilitate RNA nanotechnology

Posted by Jim Lewis on December 27th, 2011

RNA CAD tools developed for RNA-regulated control of gene expression in synthetic biology successfully engineered metabolic pathways in bacteria. Will engineering RNA-based genetic control systems lead to design tools for other RNA-based molecular machine systems?

Tutorial review of the promise of artificial molecular machines

Posted by Jim Lewis on December 11th, 2011

A tutorial review addresses the distinction between the many simple artificial molecular devices that are currently available and truly effective artificial molecular machines that would mimic the ubiquitous molecular machines present in living systems.

Lecture by Eric Drexler at Oxford on physical law and the future of nanotechnology (video)

Posted by Jim Lewis on December 6th, 2011

In a lecture at Oxford Eric Drexler argued that atomically precise manufacturing will be the next great revolution in the material basis of civilization, and discussed how we can establish reliable knowledge about key aspects of such technologies.

Using DNA as bonds to build new materials from nanoparticles

Posted by Jim Lewis on October 31st, 2011

Varying the length of the DNA used to connect the nanoparticles provides for a wide variety of nanoparticle sizes and crystal symmetries.

Nanotechnology using designed peptides to build supramolecular structures on surfaces

Posted by Jim Lewis on September 29th, 2011

An algorithm helps design peptides that will self-assemble on a given surface to produce a supramolecular structure of desired geometry.

2011 Foresight Institute Feynman Prize deadline is September 30, 2011

Posted by Jim Lewis on July 25th, 2011

Submit your own work or nominate a colleague for the 2011 Foresight Institute Feynman Prizes.

Handling flexible parts in RNA nanotechnology

Posted by Jim Lewis on June 30th, 2011

New computational method screens for small molecules that bind to RNA molecules that move through a variety of conformations.

Does quantum tunneling complicate theoretical studies of nanotechnology?

Posted by Jim Lewis on June 16th, 2011

Does the recent discovery that quantum tunneling controls a chemical reaction of a carbene complicate theoretical studies of nanotechnology, especially of diamond mechanosynthesis?

Theoretical work establishes structural stability of nanoscale diamond structures

Posted by Jim Lewis on June 10th, 2011

Computational studies show that small diamond structures of the type that might serve as nanoparts in diamondoid molecular machinery are structurally stable.