<?xml version="1.0" encoding="UTF-8"?>
<rss version="2.0"
	xmlns:content="http://purl.org/rss/1.0/modules/content/"
	xmlns:wfw="http://wellformedweb.org/CommentAPI/"
	xmlns:dc="http://purl.org/dc/elements/1.1/"
	xmlns:atom="http://www.w3.org/2005/Atom"
	xmlns:sy="http://purl.org/rss/1.0/modules/syndication/"
	xmlns:slash="http://purl.org/rss/1.0/modules/slash/"
	>

<channel>
	<title>the Foresight Institute &#187; Nanobiotechnology</title>
	<atom:link href="http://www.foresight.org/nanodot/?feed=rss2&#038;cat=65" rel="self" type="application/rss+xml" />
	<link>http://www.foresight.org/nanodot</link>
	<description>examining transformative technology</description>
	<lastBuildDate>Fri, 05 Apr 2013 18:15:22 +0000</lastBuildDate>
	<language>en</language>
	<sy:updatePeriod>hourly</sy:updatePeriod>
	<sy:updateFrequency>1</sy:updateFrequency>
	<generator>http://wordpress.org/?v=3.0.4</generator>
		<item>
		<title>RNA-protein motor for unidirectional movement of DNA in nanomachinery</title>
		<link>http://www.foresight.org/nanodot/?p=5614</link>
		<comments>http://www.foresight.org/nanodot/?p=5614#comments</comments>
		<pubDate>Mon, 01 Apr 2013 23:39:51 +0000</pubDate>
		<dc:creator>Jim Lewis</dc:creator>
				<category><![CDATA[Artificial Molecular Machines]]></category>
		<category><![CDATA[Atomically Precise Manufacturing (APM)]]></category>
		<category><![CDATA[Bionanotechnology]]></category>
		<category><![CDATA[Molecular Nanotechnology]]></category>
		<category><![CDATA[Molecular manufacturing]]></category>
		<category><![CDATA[Nano]]></category>
		<category><![CDATA[Nanobiotechnology]]></category>
		<category><![CDATA[Nanomedicine]]></category>
		<category><![CDATA[Nanotech]]></category>
		<category><![CDATA[Nanotechnology]]></category>
		<category><![CDATA[Productive Nanosystems]]></category>
		<category><![CDATA[Research]]></category>

		<guid isPermaLink="false">http://www.foresight.org/nanodot/?p=5614</guid>
		<description><![CDATA[Revolution of DNA around a central channel, rather than rotation, is the method used by a viral molecular motor to package DNA. A structure facilitating bottom-up assembly may lead to roles in nanotechnology for these nanomotors.]]></description>
			<content:encoded><![CDATA[<p><div id="attachment_5615" class="wp-caption alignleft" style="width: 310px"><a href="http://www.foresight.org/nanodot/wp-content/uploads/2013/04/guo_biomotor.jpg"><img src="http://www.foresight.org/nanodot/wp-content/uploads/2013/04/guo_biomotor-300x229.jpg" alt="" title="guo_biomotor" width="300" height="229" class="size-medium wp-image-5615" /></a><p class="wp-caption-text">Credit: Zhengyi Zhao, University of Kentucky</p></div>
<p>One of nature&#8217;s many types of molecular motors combines protein and RNA subunits to force viral (in this case, bacteriophage) DNA into a protein capsid. The understanding of the molecular mechanism by which this motor works has been advanced by the discovery that it revolves the DNA around a central channel, as the Earth revolves around the sun, rather than by rotating, as the Earth does about it axis. A hat tip to ScienceDaily for <a href="http://www.sciencedaily.com/releases/2013/03/130320095418.htm" target="_blank">pointing</a> to this research. From a University of Kentucky news release &#8220;<a href="http://uknow.uky.edu/content/guo-lab-discovers-new-class-revolution-biomotor-and-solves-mystery-viral-dna-packaging" target="_blank">Guo lab discovers new class of revolution biomotor and solves mystery in viral DNA packaging</a>:&#8221;</p>
<blockquote>
<p>Scientists at the University of Kentucky have cracked a 35-year-old mystery about the workings of natural &#8220;biomotors.&#8221; These molecular machines are serving as models for development of synthetic nanomotors that will someday pump therapeutic DNA, RNA or drugs into individual diseased cells.</p>
<p>The report, revealing the innermost mechanisms of these motors in a bacteria-killing virus and a &#8220;new way to move DNA through cells,&#8221; is being published online today in the journal <i>ACS Nano</i>.</p>
<p>The article, &#8220;Mechanism of One-Way Traffic of Hexameric Phi29 DNA Packaging Motor with Four Electropositive Relaying Layers Facilitating Anti-Parallel Revolution,&#8221; can be downloaded with free, open access from <a href="http://pubs.acs.org/doi/abs/10.1021/nn4002775" target="_blank">http://pubs.acs.org/doi/abs/10.1021/nn4002775</a>.</p>
<p>Peixuan Guo, director of the UK Nanobiotechnology Center, and his colleagues explain that two motors have been found in nature: A linear motor and a rotating motor. Now they report discovery of a third type, a revolving molecular motor.</p>
<p><span id="more-5614"></span></p>
<p>Guo points out that nanomotors will open the door to practical machines and other nanotechnology devices so small that 100,000 would fit across the width of a human hair. One major natural prototype for those development efforts has been the motor that packages DNA into the shell of bacteriophage phi29, a virus that infects and kills bacteria.</p>
<p>Guo&#8217;s own research team wants to embed a synthetic version of that motor into nanomedical devices that are injected into the body, travel to diseased cells and pump in medication. A major barrier in doing so has been uncertainty and controversy about exactly how the phi29 motor moves. Scientists thought that it worked by rotating or spinning in the same motion as the Earth turning once every 24 hours upon its own axis.</p>
<p>In their <i>ACS Nano</i> paper, Guo — with his team, Zhengyi Zhao, Emil Khisamutdinov, and Chad Schwartz — challenge that idea. Indeed, they discovered that the phi29 motor moves DNA without any rotational motion. The motor moves DNA with a revolving in the same motion as the Earth revolving around the sun in one orbit ever 365 days. The &#8220;revolution without rotation&#8221; model could resolve a big conundrum troubling the past 35 years of painstaking investigation of the mechanism of these viral DNA packaging motors, the report states.</p>
</blockquote>
<p>Near-term application of artificial molecular motors based on this work are not difficult to imagine, such as in drug delivery or gene delivery for nanomedicine. Could motors like these be useful for more complicated molecular machine systems, such as running pulleys using DNA cables to transport components in primitive molecular manufacturing systems?<br />
&mdash;James Lewis, PhD</p>
]]></content:encoded>
			<wfw:commentRss>http://www.foresight.org/nanodot/?feed=rss2&#038;p=5614</wfw:commentRss>
		<slash:comments>0</slash:comments>
		</item>
		<item>
		<title>Nanotechnology revolution: An interview with Eric Drexler</title>
		<link>http://www.foresight.org/nanodot/?p=5607</link>
		<comments>http://www.foresight.org/nanodot/?p=5607#comments</comments>
		<pubDate>Fri, 29 Mar 2013 19:47:12 +0000</pubDate>
		<dc:creator>Stephanie C</dc:creator>
				<category><![CDATA[Atomically Precise Manufacturing (APM)]]></category>
		<category><![CDATA[Bionanotechnology]]></category>
		<category><![CDATA[Computational nanotechnology]]></category>
		<category><![CDATA[Economics]]></category>
		<category><![CDATA[Energy]]></category>
		<category><![CDATA[Future Medicine]]></category>
		<category><![CDATA[Future Warfare]]></category>
		<category><![CDATA[Government programs]]></category>
		<category><![CDATA[Military nanotechnology]]></category>
		<category><![CDATA[Molecular Nanotechnology]]></category>
		<category><![CDATA[Molecular manufacturing]]></category>
		<category><![CDATA[Nano]]></category>
		<category><![CDATA[Nanobiotechnology]]></category>
		<category><![CDATA[Nanomedicine]]></category>
		<category><![CDATA[Nanotech]]></category>
		<category><![CDATA[Nanotechnology]]></category>
		<category><![CDATA[Nanotechnology Politics]]></category>
		<category><![CDATA[Productive Nanosystems]]></category>

		<guid isPermaLink="false">http://www.foresight.org/nanodot/?p=5607</guid>
		<description><![CDATA[In anticipation of Eric Drexler’s new book, Forbes contributor Bruce Dorminey interviews him about the meaning of nanotechnology and its revolutionary prospects. Selected excerpt: … In what fields would APM cause the most pronounced economic disruption and the collapse of global supply chains to more local chains? The digital revolution had far-reaching effects on information [...]]]></description>
			<content:encoded><![CDATA[<p>In anticipation of Eric Drexler’s new book, Forbes contributor Bruce Dorminey <a href="http://www.forbes.com/sites/brucedorminey/2013/02/26/nanotechnologys-civilization-changing-revolutionary-next-phase/" target="”_blank”"> interviews</a> him about the meaning of nanotechnology and its revolutionary prospects. Selected excerpt:</p>
<blockquote><p>…<br />
<strong>In what fields would APM cause the most pronounced economic disruption and the collapse of global supply chains to more local chains?</strong></p>
<p>The digital revolution had far-reaching effects on information industries. APM-based production promises to have similarly far-reaching effects, but transposed into the world of physical products. In thinking about implications for international trade and economic organization, three aspects should be kept in mind: a shift from scarce to common raw materials, a shift from long supply chains to more direct paths from raw materials to finished products, and a shift toward flexible, localized manufacturing based on production systems with capabilities that are comparable on-demand printing. This is enough to at least suggest the scope of the changes to expect from a mature form of APM-based production — which again is a clear prospect but emphatically not around the corner.<br />
…</p></blockquote>
<p><span style="font-size: x-small;">-Posted by Stephanie C</span></p>
]]></content:encoded>
			<wfw:commentRss>http://www.foresight.org/nanodot/?feed=rss2&#038;p=5607</wfw:commentRss>
		<slash:comments>0</slash:comments>
		</item>
		<item>
		<title>Re-engineering a junction to give a new twist to DNA nanotechnology</title>
		<link>http://www.foresight.org/nanodot/?p=5602</link>
		<comments>http://www.foresight.org/nanodot/?p=5602#comments</comments>
		<pubDate>Fri, 29 Mar 2013 16:51:27 +0000</pubDate>
		<dc:creator>Jim Lewis</dc:creator>
				<category><![CDATA[Atomically Precise Manufacturing (APM)]]></category>
		<category><![CDATA[Bionanotechnology]]></category>
		<category><![CDATA[Molecular Nanotechnology]]></category>
		<category><![CDATA[Molecular manufacturing]]></category>
		<category><![CDATA[Nano]]></category>
		<category><![CDATA[Nanobiotechnology]]></category>
		<category><![CDATA[Nanotech]]></category>
		<category><![CDATA[Nanotechnology]]></category>
		<category><![CDATA[Productive Nanosystems]]></category>
		<category><![CDATA[Research]]></category>

		<guid isPermaLink="false">http://www.foresight.org/nanodot/?p=5602</guid>
		<description><![CDATA[By forcing the geometry of the junctions upon which DNA nanotechnology depends, researchers have increased the collection of 2D and 3D structures that they can build to include wire frames and mesh structures.]]></description>
			<content:encoded><![CDATA[<p><div id="attachment_5603" class="wp-caption alignleft" style="width: 310px"><a href="http://www.foresight.org/nanodot/wp-content/uploads/2013/03/11han-4_s.jpg"><img src="http://www.foresight.org/nanodot/wp-content/uploads/2013/03/11han-4_s.jpg" alt="" title="Microsoft Word - SCIENCE Reprint_Fees_Galley Instructions FINAL" width="300" height="293" class="size-full wp-image-5603" /></a><p class="wp-caption-text">Credit: Biodesign Institute</p></div>
<p>Of all of the paths toward molecular manufacturing, structural DNA nanotechnology seems to provide the most frequent and photogenic advances. By re-engineering the Holliday junction, the basic cross-over structure adapted to build complex structures from DNA, Prof. Hao Yan and his colleagues has been able to construct a variety of new wire frame and mesh structures. A hat tip to ScienceDaily for <a href="http://www.sciencedaily.com/releases/2013/03/130321141448.htm" target="_blank">reprinting</a> this Arizona State University news release &#8220;<a href="https://asunews.asu.edu/20130321_dnananotechnology" target="_blank">ASU scientists develop innovative twists to DNA nanotechnology</a>&#8220;:</p>
<blockquote>
<p>In a new discovery that represents a major step in solving a critical design challenge, Arizona State University Professor Hao Yan has led a research team to produce a wide variety of 2-D and 3-D structures that push the boundaries of the burgeoning field of DNA nanotechnology.</p>
<p>The field of DNA nanotechnology utilizes nature&#8217;s design rules and the chemical properties of DNA to self-assemble into an increasingly complex menagerie of molecules for biomedical and electronic applications. Some of the Yan lab&#8217;s accomplishments include building Trojan horse-like structures to improve drug delivery to cancerous cells, electrically conductive gold nanowires, single molecule sensors and programmable molecular robots.</p>
<p>With their bio-inspired architectural works, the group continues to explore the geometrical and physical limits of building at the molecular level.</p>
<p><span id="more-5602"></span></p>
<p>&#8220;People in this field are very interested in making wire frame or mesh structures,&#8221; said Yan. &#8220;We needed to come up with new design principles that allow us to build with more complexity in three dimensions.&#8221;</p>
<p>In their latest twist to the technology, Yan&#8217;s team made new 2-D and 3-D objects that look like wire-frame art of spheres as well as molecular tweezers, scissors, a screw, hand fan, and even a spider web.</p>
<p>The Yan lab, which includes ASU Biodesign Institute colleagues Dongran Han, Suchetan Pal, Shuoxing Jiang, Jeanette Nangreave and assistant professor Yan Liu, published their results in the March 22 issue of <i>Science</i> [<a href="http://www.sciencemag.org/content/339/6126/1412" target="_blank">abstract</a>].</p>
<p>The twist in their &#8216;bottom up,&#8217; molecular Lego design strategy focuses on a DNA structure called a Holliday junction.</p>
<p>In nature, this cross-shaped, double-stacked DNA structure is like the 4-way traffic stop of genetics – where 2 separate DNA helices temporality meet to exchange genetic information. The Holliday junction is the crossroads responsible for the diversity of life on Earth, and ensures that children are given a unique shuffling of traits from a mother and father&#8217;s DNA.</p>
<p>In nature, the Holliday junction twists the double-stacked strands of DNA at an angle of about 60-degrees, which is perfect for swapping genes but sometimes frustrating for DNA nanotechnology scientists, because it limits the design rules of their structures.</p>
<p>&#8220;In principal, you can use the scaffold to connect multiple layers horizontally,&#8221; [which many research teams have utilized since the development of DNA origami by Cal Tech's Paul Rothemund in 2006]. However, when you go in the vertical direction, the polarity of DNA prevents you from making multiple layers,&#8221; said Yan. &#8220;What we needed to do is rotate the angle and force it to connect.&#8221;</p>
<p>Making the new structures that Yan envisioned required re-engineering the Holliday junction by flipping and rotating around the junction point about half a clock face, or 150 degrees. Such a feat has not been considered in existing designs.</p>
<p>&#8220;The initial idea was the hardest part,&#8221; said Yan. &#8220;Your mind doesn&#8217;t always see the possibilities so you forget about it. We had to break the conceptual barrier that this could happen.&#8221;</p>
<p>In the new study, by varying the length of the DNA between each Holliday junction, they could force the geometry at the Holliday junctions into an unconventional rearrangement, making the junctions more flexible to build for the first time in the vertical dimension. Yan calls the backyard barbeque grill-shaped structure a DNA Gridiron.</p>
<p>&#8220;We were amazed that it worked!&#8221; said Yan. &#8220;Once we saw that it actually worked, it was relatively easy to implement new designs. Now it seems easy in hindsight. If your mindset is limited by the conventional rules, it&#8217;s really hard to take the next step. Once you take that step, it becomes so obvious.&#8221;</p>
<p>The DNA Gridiron designs are programmed into a viral DNA, where a spaghetti-shaped single strand of DNA is spit out and folded together with the help of small &#8216;staple&#8217; strands of DNA that help mold the final DNA structure. In a test tube, the mixture is heated, then rapidly cooled, and everything self-assembles and molds into the final shape once cooled. Next, using sophisticated AFM and TEM imaging technology, they are able to examine the shapes and sizes of the final products and determine that they had formed correctly.</p>
<p>This approach has allowed them to build multilayered, 3-D structures and curved objects for new applications.</p>
<p>&#8220;Most of our research team is now devoted toward finding new applications for this basic toolkit we are making,&#8221; said Yan. &#8220;There is still a long way to go and a lot of new ideas to explore. We just need to keep talking to biologists, physicists and engineers to understand and meet their needs.&#8221;</p>
</blockquote>
<p>The video (computer simulation) of the sphere made from DNA, included in the news release, represents an impressive new capability. One thing I like about structural DNA nanotechnology is that every time I think they have just about exhausted the bag of tricks that DNA provides, someone proves me wrong. I look forward to seeing what else they come up with.<br />
&mdash;James Lewis, PhD</p>
]]></content:encoded>
			<wfw:commentRss>http://www.foresight.org/nanodot/?feed=rss2&#038;p=5602</wfw:commentRss>
		<slash:comments>2</slash:comments>
		</item>
		<item>
		<title>Computationally designed peptide sneaks nanoparticles past immune system</title>
		<link>http://www.foresight.org/nanodot/?p=5567</link>
		<comments>http://www.foresight.org/nanodot/?p=5567#comments</comments>
		<pubDate>Fri, 15 Mar 2013 23:50:50 +0000</pubDate>
		<dc:creator>Jim Lewis</dc:creator>
				<category><![CDATA[Bionanotechnology]]></category>
		<category><![CDATA[Computational nanotechnology]]></category>
		<category><![CDATA[Future Medicine]]></category>
		<category><![CDATA[Nano]]></category>
		<category><![CDATA[Nanobiotechnology]]></category>
		<category><![CDATA[Nanomedicine]]></category>
		<category><![CDATA[Nanoscale Bulk Technologies]]></category>
		<category><![CDATA[Nanotech]]></category>
		<category><![CDATA[Nanotechnology]]></category>
		<category><![CDATA[Research]]></category>

		<guid isPermaLink="false">http://www.foresight.org/nanodot/?p=5567</guid>
		<description><![CDATA[Nanoparticles decorated to avoid immune system recognition were tested in mice and shown to survive longer and deliver more imaging dye and drug to tumor cells.]]></description>
			<content:encoded><![CDATA[<p><div id="attachment_5568" class="wp-caption alignleft" style="width: 310px"><a href="http://www.foresight.org/nanodot/wp-content/uploads/2013/03/DischerFig.jpeg"><img src="http://www.foresight.org/nanodot/wp-content/uploads/2013/03/DischerFig.jpeg" alt="" title="DischerFig" width="300" height="204" class="size-full wp-image-5568" /></a><p class="wp-caption-text">(credit: Mary Leonard, University of Pennsylvania Biomedical Art &#038; Design)</p></div>
<p>Research into using nanotechnology for improved drug delivery continues to advance as current nanoparticle technology is combined with increasingly more sophisticated biotechnology. One major problem with using nanoparticles for targeted drug delivery is that the patient&#8217;s immune system often clears the particle before they can be effective. A new approach uses a peptide derived from an important immune system molecule to fool the immune system. A <a href="http://news.sciencemag.org/sciencenow/2013/02/a-passport-to-nanomedicine-succe.html" target="_blank">commentary</a> accompanying the publication (<a href="http://www.sciencemag.org/content/339/6122/971" target="_blank">abstract</a>) of the research in <i>Science</i> describes how short peptides from a human protein called CD47, which tells important immune system cells that cells or particles bearing the protein are human, not foreign, were used as a &#8220;passport&#8221; to get nanoparticles past the immune system. Additional details are supplied in a University of Pennsylvania news release &#8220;<a href="http://www.upenn.edu/pennnews/news/penn-researchers-develop-protein-passport-help-nanoparticles-get-past-immune-system" target="_blank">Penn Researchers Develop Protein ‘Passport&#8217; That Helps Nanoparticles Get Past Immune System</a>&#8220;:</p>
<blockquote>
<p>&hellip; The research was conducted by professor Dennis Discher, graduate students Pia Rodriguez, Takamasa Harada, David Christian and Richard K. Tsai and postdoctoral fellow Diego Pantano &hellip; &#8220;From your body&#8217;s perspective,&#8221; Rodriguez said, &#8220;an arrowhead a thousand years ago and a pacemaker today are treated the same — as a foreign invader.</p>
<p>&#8220;We&#8217;d really like things like pacemakers, sutures and drug-delivery vehicles to not cause an inflammatory response from the innate immune system.&#8221;</p>
<p>The innate immune system attacks foreign bodies in a general way. Unlike the learned response of the adaptive immune system, which includes the targeted antibodies that are formed after a vaccination, the innate immune system tries to destroy everything it doesn&#8217;t recognize as being part of the body.</p>
<p>This response has many cellular components, including macrophages — literally &#8220;big eaters&#8221; — that find, engulf and destroy invaders. Proteins in blood serum work in tandem with macrophages; they adhere to objects in the blood stream and draw macrophages&#8217; attention. If the macrophage determines these proteins are stuck to a foreign invader, they will eat it or signal other macrophages to form a barrier around it.</p>
<p><span id="more-5567"></span></p>
<p>Drug-delivery nanoparticles naturally trigger this response, so researchers&#8217; earlier attempts to circumvent it involved coating the particles with polymer &#8220;brushes.&#8221; These brushes stick out from the nanoparticle and attempt to physically block various blood serum proteins from sticking to its surface.</p>
<p>However, these brushes only slow down the macrophage-signaling proteins, so Discher and colleagues tried a different approach: Convincing the macrophages that the nanoparticles were part of the body and shouldn&#8217;t be cleared.</p>
<p>In 2008, Discher&#8217;s group showed that the human protein CD47, found on almost all mammalian cell membranes, binds to a macrophage receptor known as SIRPa in humans. Like a patrolling border guard inspecting a passport, if a macrophage&#8217;s SIRPa binds to a cell&#8217;s CD47, it tells the macrophage that the cell isn&#8217;t an invader and should be allowed to proceed on.</p>
<p>&#8220;There may be other molecules that help quell the macrophage response,&#8221; Discher said. &#8220;But human CD47 is clearly one that says, ‘Don&#8217;t eat me&#8217;.&#8221;</p>
<p>Since the publication of that study, other researchers determined the combined structure of CD47 and SIRPa together. Using this information, Discher&#8217;s group was able to computationally design the smallest sequence of amino acids that would act like CD47. This &#8220;minimal peptide&#8221; would have to fold and fit well enough into the receptor of SIRPa to serve as a valid passport.</p>
<p>After chemically synthesizing this minimal peptide, Discher&#8217;s team attached it to conventional nanoparticles that could be used in a variety of experiments.</p>
<p>&#8220;Now, anyone can make the peptide and put it on whatever they want,&#8221; Rodriguez said.</p>
<p>The research team&#8217;s experiments used a mouse model to demonstrate better imaging of tumors and as well as improved efficacy of an anti-cancer drug-delivery particle.</p>
<p>As this minimal peptide might one day be attached to a wide range of drug-delivery vehicles, the researchers also attached antibodies of the type that could be used in targeting cancer cells or other kinds of diseased tissue. Beyond a proof of concept for therapeutics, these antibodies also served to attract the macrophages&#8217; attention and ensure the minimal peptide&#8217;s passport was being checked and approved.</p>
<p>&#8220;We&#8217;re showing that the peptide actually does inhibit the macrophage&#8217;s response,&#8221; Discher said. &#8220;We force the interaction and then overwhelm it.&#8221;</p>
<p>The test of this minimal peptide&#8217;s efficacy was in mice that were genetically modified so their mac[r]ophages had SIRPa receptors similar to the human version. The researchers injected two kinds of nanoparticles — ones carrying the peptide passport and ones without — and then measured how fast the mice&#8217;s immune systems cleared them.</p>
<p>&#8220;We used different fluorescent dyes on the two kinds of nanoparticles, so we could take blood samples every 10 minutes and measure how many particles of each kind were left using flow cytometry,&#8221; Rodriguez said. &#8220;We injected the two particles in a 1-to-1 ratio and 20-30 minutes later, there were up to four times as many particles with the peptide left.&#8221;</p>
<p>Even giving therapeutic nanoparticles an additional half-hour before they are eaten by macrophages could be a major boon for treatments. Such nanoparticles might need to make a few trips through the macrophage-heavy spleen and liver to find their targets, but they shouldn&#8217;t stay in the body indefinitely. Other combinations of exterior proteins might be appropriate for more permanent devices, such as pacemaker leads, enabling them to hide from the immune system for longer periods of time.</p>
<p>While more research is necessary before such applications become a reality, reducing the peptide down to a sequence of only a few amino acids was a critical step. The relative simplicity of this passport molecule to be more easily synthesized makes it a more attractive component for future therapeutics. &hellip;</p>
</blockquote>
<p>A very interesting feature of this work is the computational identification  of a small structure, in this case a peptide, that can substitute for a crucial part of the function of a large biological system (phagocytic cells to recognize non-self). We should probably expect to see this strategy often as nanomedicine evolves from predominantly biotechnology toward more machine-like advanced nanotechnology.<br />
&mdash;James Lewis, PhD</p>
]]></content:encoded>
			<wfw:commentRss>http://www.foresight.org/nanodot/?feed=rss2&#038;p=5567</wfw:commentRss>
		<slash:comments>0</slash:comments>
		</item>
		<item>
		<title>A teenager&#8217;s step toward nanomedicine innovation</title>
		<link>http://www.foresight.org/nanodot/?p=5562</link>
		<comments>http://www.foresight.org/nanodot/?p=5562#comments</comments>
		<pubDate>Wed, 06 Mar 2013 18:01:41 +0000</pubDate>
		<dc:creator>Stephanie C</dc:creator>
				<category><![CDATA[Bionanotechnology]]></category>
		<category><![CDATA[Future Medicine]]></category>
		<category><![CDATA[NanoEducation]]></category>
		<category><![CDATA[Nanobiotechnology]]></category>
		<category><![CDATA[Nanomedicine]]></category>
		<category><![CDATA[Nanotech]]></category>

		<guid isPermaLink="false">http://www.foresight.org/nanodot/?p=5562</guid>
		<description><![CDATA[In this Forbes interview, contributor John Nosta introduces us to a teen worth watching: fifteen-year-old Jack Andraka, whose effort to design a nanotube-based sensor for pancreatic cancer detection was initially ignored. The interview taps into some aspects of how innovation occurs and the challenges of bringing new ideas to fruition &#8211; aspects which transcend age, [...]]]></description>
			<content:encoded><![CDATA[<p>In this <a href="http://www.forbes.com/sites/johnnosta/2013/02/01/cancer-innovation-and-a-boy-named-jack/" target=”_blank”>Forbes interview</a>, contributor John Nosta introduces us to a teen worth watching: fifteen-year-old Jack Andraka, whose effort to design a nanotube-based sensor for pancreatic cancer detection was initially ignored. The interview taps into some aspects of how innovation occurs and the challenges of bringing new ideas to fruition &#8211; aspects which transcend age, education level, and field of study. In Jack’s words:</p>
<blockquote><p>
…<br />
I like to read a lot of journals and articles about different topics and then lie on the couch or take a walk and just let all the information settle. Then all of a sudden I can get an idea and connect some dots. Then it’s back to reading so I can fill in missing pieces.<br />
…<br />
[I] found the names and professional emails of lots of professors in my area who were working on pancreatic cancer…. Week after week I’d receive endless rejections. The most helpful one was actually from a researcher who took the time to point out every flaw and reason why my project was impossible.<br />
…<br />
One of my most world- expanding experiences came very quickly when I went to Singularity U in California. I met people who weren’t afraid of failure, but just used failure to say well that path didn’t work and moved on.
</p></blockquote>
<p>Stories like this are good reminders to value not only good ideas, but to value people who show propensity for innovation.<br />
<span style="font-size: x-small;">-Posted by Stephanie C</span></p>
]]></content:encoded>
			<wfw:commentRss>http://www.foresight.org/nanodot/?feed=rss2&#038;p=5562</wfw:commentRss>
		<slash:comments>0</slash:comments>
		</item>
		<item>
		<title>Proposed Brain Activity Map may also advance nanotechnology</title>
		<link>http://www.foresight.org/nanodot/?p=5556</link>
		<comments>http://www.foresight.org/nanodot/?p=5556#comments</comments>
		<pubDate>Fri, 01 Mar 2013 23:55:29 +0000</pubDate>
		<dc:creator>Jim Lewis</dc:creator>
				<category><![CDATA[Atomically Precise Manufacturing (APM)]]></category>
		<category><![CDATA[Bionanotechnology]]></category>
		<category><![CDATA[Found On Web]]></category>
		<category><![CDATA[Government programs]]></category>
		<category><![CDATA[Machine Intelligence]]></category>
		<category><![CDATA[Media Mentions]]></category>
		<category><![CDATA[Molecular Nanotechnology]]></category>
		<category><![CDATA[Molecular manufacturing]]></category>
		<category><![CDATA[Nano]]></category>
		<category><![CDATA[Nanobiotechnology]]></category>
		<category><![CDATA[Nanoscale Bulk Technologies]]></category>
		<category><![CDATA[Nanotech]]></category>
		<category><![CDATA[Nanotechnology]]></category>
		<category><![CDATA[Productive Nanosystems]]></category>

		<guid isPermaLink="false">http://www.foresight.org/nanodot/?p=5556</guid>
		<description><![CDATA[A proposed large project to produce a dynamic map of the functional connectome of the human brain will require a convergence of neuroscience, biotechnology, nanotechnology, and computation, and may therefore spur the development of advanced nanotechnology leading to molecular manufacturing.]]></description>
			<content:encoded><![CDATA[<p><div id="attachment_5557" class="wp-caption alignleft" style="width: 210px"><a href="http://www.foresight.org/nanodot/wp-content/uploads/2013/03/BAM-Sporns.jpg"><img src="http://www.foresight.org/nanodot/wp-content/uploads/2013/03/BAM-Sporns.jpg" alt="" title="BAM-Sporns" width="200" height="194" class="size-full wp-image-5557" /></a><p class="wp-caption-text">(credit: Comp. Cog. Neurosci Lab/ Olaf Sporns, Indiana Univ.)</p></div>
<p>A proposal alluded to by President Obama in his State of the Union address to construct a dynamic &#8220;functional connectome&#8221; Brain Activity Map (BAM) would leverage current progress in neuroscience, synthetic biology, and nanotechnology to develop a map of each firing of every neuron in the human brain&mdash;a hundred billion neurons sampled on millisecond time scales. Although not the intended goal of this effort, a project on this scale, if it is funded, should also indirectly advance efforts to develop artificial intelligence and atomically precise manufacturing. In his <a href="http://www.bobblum.com/index.html" target="_blank">blog</a>, Robert L. Blum provides an excellent overview and brief introduction. From &#8220;<a href="http://www.bobblum.com/ESSAYS/NEUROPSYCH/BAM.html" target="_blank">BAM: Brain Activity Map: Every Spike from Every Neuron</a>&#8220;:</p>
<blockquote>
<p>A recent research proposal called BAM for Brain Activity Map Project generated much excitement. (The BAM proposal, published in <a href="http://arep.med.harvard.edu/pdf/Alivisatos_BAM_12.pdf" target="_blank">Neuron in June 2012 is online</a>, and an <a href="http://academiccommons.columbia.edu/item/ac:147969" target="_blank">earlier draft with far greater detail is also online</a>.)</p>
<p>(Addendum: 18 Feb 2013: I started drafting this story in Nov, 2012. Today it was headline news when it was made public that THIS is the very proposal that President Obama alluded to in his recent State of the Union address. See <a href="http://www.nytimes.com/2013/02/18/science/project-seeks-to-build-map-of-human-brain.html?pagewanted=all&amp;src=ISMR_AP_LO_MST_FB&amp;_r=1&amp;" target="_blank">John Markoff&#8217;s <i>NY Times</i> piece</a>. NIH is drafting a 3 billion dollar, 10 year proposal to fund this project. Also see this <a href="http://www.nytimes.com/2013/02/26/science/proposed-brain-mapping-project-faces-significant-hurdles.html?_r=1&amp;" target="_blank">25 Feb 2013 <i>NY Times</i> follow-up by Markoff</a>.) &hellip;</p>
<p>The essence of the BAM proposal is to create the technology over the coming decade to be able to record every spike from every neuron in the brain of a behaving organism. While this notion seems insanely ambitious, coming from a group of top investigators, the paper deserves scrutiny. At minimum it shows what might be achieved in the future by the combination of nanotechnology and neuroscience. &hellip;</p>
</blockquote>
<p><span id="more-5556"></span></p>
<p>The <a href="http://arep.med.harvard.edu/pdf/Alivisatos_BAM_12.pdf" target="_blank"><i>Neuron</i> article</a> cited by Blum argues that in addition to breakthroughs in basic science with large medical and economic benefits, the BAM project will advance technology in terms of important general capabilities.</p>
<blockquote>
<p>Many technological breakthroughs are bound to arise from the BAM Project, as it is positioned at the convergence of biotechnology and nanotechnology. These new technologies could include optical techniques to image in 3D; sensitive, miniature, and intelligent nanosystems for fundamental investigations in the life sciences, medicine, engineering, and environmental applications; capabilities for storage and manipulation of massive data sets; and development of biologically inspired, computational devices.</p>
</blockquote>
<p>I think the emphasis on nanosystems of nanodevices integrated to provide complex functions is very important, even if many or most of those devices will, in the beginning, not be atomically precise. The <a href="http://academiccommons.columbia.edu/item/ac:147969" target="_blank">more detailed description of the BAM proposal</a> cited by Blum above hints at how nanoparticle-based sensors could be developed to noninvasively provide micrometer-scale spatial resolution and millisecond-scale temporal resolution to groups of millions of neurons deep inside the brain of a living, active animal (or human). The mention combining semiconductor quantum dots and nanodiamonds with organic nanostructures to functionalize them, so that they may be directed to and embedded in neural membranes to monitor synapses. In addition, nanotubes or nanowires could be developed to deliver photons to specific locations, or collect or release specific chemicals. Further, they suggest developing graphene into membrane patches for detailed monitoring of neurons. Taken together, the requirements for this ambitious project entail the need to develop a variety of nanoparticles for specific applications, and then integrating multifunctional nanoprobes, nanoparticles, and nanodevices into large functional systems, and producing such nanosystems en masse.</p>
<p>In his <a href="http://www.nytimes.com/2013/02/18/science/project-seeks-to-build-map-of-human-brain.html?pagewanted=all&amp;src=ISMR_AP_LO_MST_FB&amp;_r=1&amp;" target="_blank"><i>NY Times</i> report</a> John Markoff notes the possible effect of this project on the development of artificial intelligence: &#8220;Moreover, the project holds the potential of paving the way for advances in artificial intelligence.&#8221; Indeed, the information to be provided by BAM about how circuits of thousands or millions of neurons work should advance Ray Kurzweil&#8217;s program of reverse engineering the human brain to develop artificial general intelligence, as described in his new book <a href="http://www.howtocreateamind.com/" target="_blank"><i>How to Create a Mind: The Secret of Human Thought Revealed</i></a>.</p>
<p>The next best thing to large program to develop molecular manufacturing is a large program aimed at other worthy and useful goals that also makes heavy use of nanotechnology and may promote some of the same or similar enabling technologies that will lead toward productive nanosystems.<br />
&mdash;James Lewis, PhD</p>
]]></content:encoded>
			<wfw:commentRss>http://www.foresight.org/nanodot/?feed=rss2&#038;p=5556</wfw:commentRss>
		<slash:comments>0</slash:comments>
		</item>
		<item>
		<title>Nanotechnology delivers potent anti-cancer agent where it needs to go</title>
		<link>http://www.foresight.org/nanodot/?p=5536</link>
		<comments>http://www.foresight.org/nanodot/?p=5536#comments</comments>
		<pubDate>Fri, 22 Feb 2013 18:52:44 +0000</pubDate>
		<dc:creator>Jim Lewis</dc:creator>
				<category><![CDATA[Bionanotechnology]]></category>
		<category><![CDATA[Future Medicine]]></category>
		<category><![CDATA[Nano]]></category>
		<category><![CDATA[Nanobiotechnology]]></category>
		<category><![CDATA[Nanomedicine]]></category>
		<category><![CDATA[Nanoscale Bulk Technologies]]></category>
		<category><![CDATA[Nanotech]]></category>
		<category><![CDATA[Nanotechnology]]></category>
		<category><![CDATA[Research]]></category>

		<guid isPermaLink="false">http://www.foresight.org/nanodot/?p=5536</guid>
		<description><![CDATA[Core-shell nanocapsules deliver a potent protein complex to the nucleus of cancer cells where it induces them to commit suicide, while the complex degrades harmlessly in the cytoplasm of normal cells.]]></description>
			<content:encoded><![CDATA[<p><div id="attachment_5537" class="wp-caption alignleft" style="width: 266px"><a href="http://www.foresight.org/nanodot/wp-content/uploads/2013/02/Cancer_and_Nanocapsules-c.jpg"><img src="http://www.foresight.org/nanodot/wp-content/uploads/2013/02/Cancer_and_Nanocapsules-c.jpg" alt="" title="Cancer_and_Nanocapsules-c" width="256" height="135" class="size-full wp-image-5537" /></a><p class="wp-caption-text">(Credit: Courtesy of UCLA Engineering)</p></div>
<p>One of the most promising near-term applications of current nanotechnology is in targeted drug delivery to treat cancer. Despite the fact that a number of approaches based on very different areas of nanoscience have shown promise in delivering a wide variety of agents in different animal models of cancer, a number of challenges remain, principally involving the stability of the nanoparticles in the circulatory system, getting them into cancer cells, releasing the cargo to kill the cells, and the fact that cancer cells often have defenses against anti-cancer drugs. A core-shell nanoparticle has been cleverly adapted to deliver a particularly effective agent to where it is needed. A hat tip to ScienceDaily for <a href="http://www.sciencedaily.com/releases/2013/02/130206141649.htm" target="_blank">reprinting</a> this UCLA news release &#8220;<a href="http://newsroom.ucla.edu/portal/ucla/tiny-capsule-effectively-treats-243192.aspx" target="_blank">Tiny capsule effectively kills cancer cells</a>&#8220;:</p>
<blockquote>
<p>Devising a method for more precise and less invasive treatment of cancer tumors, a team led by researchers from the UCLA Henry Samueli School of Engineering and Applied Science has developed a degradable nanoscale shell to carry proteins to cancer cells and stunt the growth of tumors without damaging healthy cells.</p>
<p>In a new study, published online Feb. 1 in the peer-reviewed journal <i>Nano Today</i> [<a href="http://dx.doi.org/10.1016/j.nantod.2012.12.003" target="_blank">abstract</a>], a group led by Yi Tang, a professor of chemical and biomolecular engineering and a member of the California NanoSystems Institute at UCLA, reports developing tiny shells composed of a water-soluble polymer that safely deliver a protein complex to the nucleus of cancer cells to induce their death. The shells, which at about 100 nanometers are roughly half the size of the smallest bacterium, degrade harmlessly in non-cancerous cells.</p>
<p><span id="more-5536"></span></p>
<p>The process does not present the risk of genetic mutation posed by gene therapies for cancer, or the risk to healthy cells caused by chemotherapy, which does not effectively discriminate between healthy and cancerous cells, Tang said.</p>
<p>&#8220;This approach is potentially a new way to treat cancer,&#8221; said Tang. &#8220;It is a difficult problem to deliver the protein if we don&#8217;t use this vehicle. This is a unique way to treat cancer cells and leave healthy cells untouched.&#8221;</p>
<p>The cell-destroying material, apoptin, is a protein complex derived from an anemia virus in birds. This protein cargo accumulates in the nucleus of cancer cells and signals to the cell to undergo programmed self-destruction.</p>
<p>The polymer shells are developed under mild physiological conditions so as not to alter the chemical structure of the proteins or cause them to clump, preserving their effectiveness on the cancer cells.</p>
<p>Tests done on human breast cancer cell lines in laboratory mice showed significant reduction in tumor growth.</p>
<p>&#8220;Delivering a large protein complex such as apoptin to the innermost compartment of tumor cells was a challenge, but the reversible polymer encapsulation strategy was very effective in protecting and escorting the cargo in its functional form,&#8221; said Muxun Zhao, lead author of the research and a graduate student in chemical and biomolecular engineering at UCLA.</p>
<p>Tang&#8217;s group continues to research ways of more precisely targeting tumors, prolonging the circulation time of the capsules and delivering other highly sought-after proteins to cancer cells.</p>
</blockquote>
<p>There is nothing very interesting here from the standpoint of the eventual development of atomically precise manufacturing, but this work presents an excellent case for making the most of the current tools of nanotechnology and employing a deep knowledge of biotechnology and using imaging technology to see what happens inside of cells to develop a promising solution to a set of difficult and important problems.<br />
&mdash;James Lewis, PhD</p>
]]></content:encoded>
			<wfw:commentRss>http://www.foresight.org/nanodot/?feed=rss2&#038;p=5536</wfw:commentRss>
		<slash:comments>0</slash:comments>
		</item>
		<item>
		<title>Christine Peterson on pushing the future in a positive direction</title>
		<link>http://www.foresight.org/nanodot/?p=5532</link>
		<comments>http://www.foresight.org/nanodot/?p=5532#comments</comments>
		<pubDate>Wed, 20 Feb 2013 18:11:48 +0000</pubDate>
		<dc:creator>Jim Lewis</dc:creator>
				<category><![CDATA[About Foresight]]></category>
		<category><![CDATA[Abuse of Advanced Technology]]></category>
		<category><![CDATA[Atomically Precise Manufacturing (APM)]]></category>
		<category><![CDATA[Bionanotechnology]]></category>
		<category><![CDATA[Biosphere]]></category>
		<category><![CDATA[Environment, Health, and Safety]]></category>
		<category><![CDATA[Foresight News]]></category>
		<category><![CDATA[Future Medicine]]></category>
		<category><![CDATA[Future Warfare]]></category>
		<category><![CDATA[Healing/preserving environment]]></category>
		<category><![CDATA[Health & longevity]]></category>
		<category><![CDATA[Life extension]]></category>
		<category><![CDATA[Lifestyle]]></category>
		<category><![CDATA[Machine Intelligence]]></category>
		<category><![CDATA[Meetings & Conferences]]></category>
		<category><![CDATA[Military nanotechnology]]></category>
		<category><![CDATA[Molecular Nanotechnology]]></category>
		<category><![CDATA[Molecular manufacturing]]></category>
		<category><![CDATA[Nano]]></category>
		<category><![CDATA[Nanobiotechnology]]></category>
		<category><![CDATA[Nanomedicine]]></category>
		<category><![CDATA[Nanotech]]></category>
		<category><![CDATA[Nanotechnology]]></category>
		<category><![CDATA[Open Source]]></category>
		<category><![CDATA[Space]]></category>

		<guid isPermaLink="false">http://www.foresight.org/nanodot/?p=5532</guid>
		<description><![CDATA[In a 47-minute interview Christine Peterson discusses the future that science and technology is bringing over the next few decades, and how to get involved to push the future in a positive direction.]]></description>
			<content:encoded><![CDATA[<p><div id="attachment_5533" class="wp-caption alignleft" style="width: 195px"><a href="http://www.foresight.org/nanodot/wp-content/uploads/2013/02/018_CP_smaller.jpg"><img src="http://www.foresight.org/nanodot/wp-content/uploads/2013/02/018_CP_smaller.jpg" alt="" title="018_CP_smaller" width="185" height="220" class="size-full wp-image-5533" /></a><p class="wp-caption-text">Christine Peterson</p></div>
<p>Foresight Co-Founder and Past President Christine Peterson is interviewed on the Singularity Weblog in a 47-minute tour that covers nanotechnology, the founding of the Foresight Institute, her work on personal life extension through <a href="http://healthactivator.com/" target="_blank">Health Activator</a>, open source, and the Technological Singularity. &#8220;<a href="http://www.singularityweblog.com/christine-peterson-on-singularity-1-on-1/" target="_blank">Christine Peterson on Singularity 1 on 1: Join Us to Push the Future in a Positive Direction</a>&#8220;:</p>
<blockquote>
<p>During my Singularity 1 on 1 interview with Christine Peterson we discuss a variety of topics such as: how she got interested in nanotechnology and the definition thereof; how, together with Eric Drexler, she started the Foresight Institute for Nanotechnology; her interest in life extension; Dr. Drexler’s seminal book Engines of Creation; cryonics and chemical brain preservation; 23andMe and other high- and low-tech tips for improved longevity; whether we should fear nanotechnology or not; the 3 most exciting promises of nanotech; women in technology; coining the term “open source” and using Apple computers; the technological singularity and her take on it&hellip;</p>
</blockquote>
<p>Hear Christine discuss some challenges while presenting an essentially optimistic message&mdash;a wonderful future is coming from science and technology over the next few decades&mdash;a future that encourages everyone to get involved.<br />
&mdash;James Lewis, PhD</p>
]]></content:encoded>
			<wfw:commentRss>http://www.foresight.org/nanodot/?feed=rss2&#038;p=5532</wfw:commentRss>
		<slash:comments>0</slash:comments>
		</item>
		<item>
		<title>Christine Peterson interviewed on nanotechnology</title>
		<link>http://www.foresight.org/nanodot/?p=5528</link>
		<comments>http://www.foresight.org/nanodot/?p=5528#comments</comments>
		<pubDate>Tue, 12 Feb 2013 18:50:34 +0000</pubDate>
		<dc:creator>Jim Lewis</dc:creator>
				<category><![CDATA[About Foresight]]></category>
		<category><![CDATA[Abuse of Advanced Technology]]></category>
		<category><![CDATA[Atomically Precise Manufacturing (APM)]]></category>
		<category><![CDATA[Bionanotechnology]]></category>
		<category><![CDATA[Biosphere]]></category>
		<category><![CDATA[Environment, Health, and Safety]]></category>
		<category><![CDATA[Ethics]]></category>
		<category><![CDATA[Foresight News]]></category>
		<category><![CDATA[Future Medicine]]></category>
		<category><![CDATA[Future Warfare]]></category>
		<category><![CDATA[Healing/preserving environment]]></category>
		<category><![CDATA[Health & longevity]]></category>
		<category><![CDATA[Life extension]]></category>
		<category><![CDATA[Machine Intelligence]]></category>
		<category><![CDATA[Military nanotechnology]]></category>
		<category><![CDATA[Molecular Nanotechnology]]></category>
		<category><![CDATA[Molecular manufacturing]]></category>
		<category><![CDATA[Nano]]></category>
		<category><![CDATA[Nanobiotechnology]]></category>
		<category><![CDATA[Nanomedicine]]></category>
		<category><![CDATA[Nanoscale Bulk Technologies]]></category>
		<category><![CDATA[Nanotech]]></category>
		<category><![CDATA[Nanotechnology]]></category>
		<category><![CDATA[Nanotechnology Politics]]></category>

		<guid isPermaLink="false">http://www.foresight.org/nanodot/?p=5528</guid>
		<description><![CDATA[An interview with Foresight Co-Founder and Past President Christine Peterson covering both the current state and the future prospects of nanotechnology is available on Youtube.]]></description>
			<content:encoded><![CDATA[<p>An interview with Foresight Co-Founder and Past President Christine Peterson was filmed by Adam Ford in conjunction with the Humanity+ conference in San Francisco and is now <a href="https://www.youtube.com/watch?v=dXEMFlrm0Rs">available on YouTube</a>. The interview is (surprise!) about nanotechnology, and the topics range from exciting medical applications to come in the next ten years from current nanoparticle technology to longer term efforts to develop smart objects, from utility fog to medical nanorobots. Other topics include near-term health and environmental issues with some nanoparticle technology, long term political issues after advanced nanotechnology is developed, the role of software, and, most of all, what we stand to gain when we learn to extend control of our manufacturing technology to atomic precision.<br />
&mdash;James Lewis, PhD</p>
]]></content:encoded>
			<wfw:commentRss>http://www.foresight.org/nanodot/?feed=rss2&#038;p=5528</wfw:commentRss>
		<slash:comments>0</slash:comments>
		</item>
		<item>
		<title>Synthetic biology industrial revolution inspires hope for molecular manufacturing</title>
		<link>http://www.foresight.org/nanodot/?p=5503</link>
		<comments>http://www.foresight.org/nanodot/?p=5503#comments</comments>
		<pubDate>Sun, 03 Feb 2013 01:05:29 +0000</pubDate>
		<dc:creator>Jim Lewis</dc:creator>
				<category><![CDATA[Bionanotechnology]]></category>
		<category><![CDATA[Energy]]></category>
		<category><![CDATA[Future Medicine]]></category>
		<category><![CDATA[Molecular Nanotechnology]]></category>
		<category><![CDATA[Molecular manufacturing]]></category>
		<category><![CDATA[Nano]]></category>
		<category><![CDATA[Nanobiotechnology]]></category>
		<category><![CDATA[Nanomedicine]]></category>
		<category><![CDATA[Nanotech]]></category>
		<category><![CDATA[Nanotechnology]]></category>
		<category><![CDATA[Productive Nanosystems]]></category>
		<category><![CDATA[Research]]></category>

		<guid isPermaLink="false">http://www.foresight.org/nanodot/?p=5503</guid>
		<description><![CDATA[A demonstration that most fundamental biological processes can be implemented in a test tube as efficiently as in live bacteria provides synthetic biology the tools to create a 'new industrial revolution', which may or may not lead to more general molecular manufacturing.]]></description>
			<content:encoded><![CDATA[<p><div id="attachment_5504" class="wp-caption alignleft" style="width: 182px"><a href="http://www.foresight.org/nanodot/wp-content/uploads/2013/02/ImperialCollegeLondon-bacterium.jpeg"><img src="http://www.foresight.org/nanodot/wp-content/uploads/2013/02/ImperialCollegeLondon-bacterium.jpeg" alt="" title="ImperialCollegeLondon-bacterium" width="172" height="200" class="size-full wp-image-5504" /></a><p class="wp-caption-text">Harmless bacteria could be re-engineered into microscopic factories that could, in addition to more immediate applications, perhaps provide components for more general molecular manufacturing systems. (credit Imperial College, London)</p></div>
<p>Synthetic biology and molecular manufacturing/productive nanosystems have in common the effort to rationally engineer systems to make and assemble parts for complex molecular machine systems. The effort in synthetic biology to design complex biological systems in a hierarchical architecture from well-characterized molecular parts is accelerating. A hat tip to ScienceDaily for <a href="http://www.sciencedaily.com/releases/2013/02/130201090612.htm" target="_blank">reprinting</a> this Imperial College news release &#8220;<a href="http://www3.imperial.ac.uk/newsandeventspggrp/imperialcollege/newssummary/news_31-1-2013-12-18-1" target="_blank">Discovery in synthetic biology a step closer to new industrial revolution</a>&#8220;:</p>
<blockquote>
<p>Scientists report that they have developed a method that cuts down the time it takes to make new ‘parts’ for microscopic biological factories from 2 days to only 6 hours.</p>
<p>The scientists, from Imperial College London, say their research brings them another step closer to a new kind of industrial revolution, where parts for these biological factories could be mass-produced. These factories have a wealth of applications including better drug delivery treatments for patients, enhancements in the way that minerals are mined from deep underground and advances in the production of biofuels.</p>
<p>Professor Paul Freemont, Co- Director of the Centre for Synthetic Biology and Innovation at Imperial College London and principal co-investigator of the study, which is published today in the journal <i>Nucleic Acids Research</i> [<a href="http://nar.oxfordjournals.org/content/early/2013/01/31/nar.gkt052" target="_blank">abstract</a>, <a href="http://nar.oxfordjournals.org/content/early/2013/01/31/nar.gkt052.full.pdf+html" target="_blank">free full text PDF</a>], says:</p>
<p><span id="more-5503"></span></p>
<p>&#8220;Before the industrial revolution most items were made by hand, which meant that they were slower to manufacture, more expensive to produce and limited in number. We are at a similar juncture in synthetic biology, having to test and build each part from scratch, which is a long and slow process. We demonstrate in our study a new method that could help to rapidly scale up the production and testing of biological parts.&#8221;</p>
<p>Parts made up of DNA are re-engineered by scientists and put into cells to make biological factories. However, a major bottleneck in synthetic biology is the lack of parts from which to build new types of factories. To build parts using the current time-consuming method, scientists have to re-engineer DNA in a cell and observe how it works. If it functions according to their specifications, then the scientists store the part specifications in a catalogue.</p>
<p>Now, scientists from Imperial College London have devised a much quicker method that does away with the need for them to re-engineer a cell every time they want to make a new part. The team say their work could lead to vast new libraries of off-the-shelf components that could be used to build more sophisticated biological factories.</p>
<p>James Chappell, co-author of the study from the Centre for Synthetic Biology and Innovation at Imperial College London, says:</p>
<p>&#8220;One of the major goals in synthetic biology is to find a way to industrialise our processes so that we can mass produce these biological factories much in the same way that industries such as car manufacturers mass produce vehicles in a factory line. This could unlock the potential of this field of science and enable us to develop much more sophisticated devices that could be used to improve many facets of society. Excitingly, our research takes us one step closer to this reality, providing a rapid way of developing new parts.&#8221;</p>
<p>When a cell is re-engineered, the re-programmed DNA in the cell encodes a message that is conveyed by molecules called messenger ribonucleic acid (mRNA) to the cell’s production factories called ribosomes. The ribosomes translate the genetic information into a command that instructs the cell to perform functions. For example, scientists can already re-engineer a cell into an infection detector factory, which produces a protein that detects chemical signals from human pathogenic bacteria and changes colour to indicate their presence.</p>
<p>In the study, the Imperial researchers demonstrate for the first time that the same method can be achieved in a test tube outside of a cell. This involves extracting from cells the machinery that produces mRNA and proteins and providing the energy and building blocks to help them survive in test tubes. The team then add their re-programmed DNA to the solution and observe how it functions.</p>
<p>The advantage of this method is that scientists can develop litres of this cell-like environment so that multiple re-programmed DNA can be tested simultaneously, which speeds up the production process of parts.</p>
<p>The next stage of the research is to expand the types of parts and devices that can be developed using this method.  They also are aiming to develop a method using robots to speed up and make the whole process automated.</p>
<p>Professor Richard Kitney, co- Director of the Centre for Synthetic Biology and Innovation at Imperial College London says: &#8220;Synthetic biology is seen by the British Government as having the potential to create new industries and jobs for the benefit of the UK economy. This work is part of a wider, major research programme within the Centre to develop technology that can be used across a range of industrial applications.&#8221;</p>
</blockquote>
<p>The hope driving this research is that biological parts will transform industrial sectors like drug delivery and biofuels production into molecular manufacturing processes. Whether synthetic biology can eventually be made to contribute parts for nanofactories to implement more general molecular manufacturing using stronger, more rigid parts, remains to be seen.<br />
&mdash;James Lewis, PhD</p>
]]></content:encoded>
			<wfw:commentRss>http://www.foresight.org/nanodot/?feed=rss2&#038;p=5503</wfw:commentRss>
		<slash:comments>0</slash:comments>
		</item>
	</channel>
</rss>